Index _ | A | D | G | H | J | L | M | N | P | R | S | T _ __init__() (scviva.data.NeighborhoodGraphField method) (scviva.data.SpatialCoordsField method) (scviva.external.RNAStereoscope method) (scviva.external.SpatialStereoscope method) (scviva.external.Tangram method) (scviva.model.base.SpatialBaseModel method) (scviva.model.base.SpatialDeconvolutionMixin method) (scviva.model.base.SpatialNeighborhoodMixin method) (scviva.model.base.SpatialPredictiveMixin method) (scviva.model.DestVI method) (scviva.model.GIMVI method) (scviva.model.ResolVI method) (scviva.model.SCVIVA method) (scviva.module.JVAE method) (scviva.module.nicheVAE method) (scviva.tl.HarremanAnalysis method) A average_local_correlation_plot() (in module scviva.pl.harreman) D DestVI (class in scviva.model) G GIMVI (class in scviva.model) H HarremanAnalysis (class in scviva.tl) J JVAE (class in scviva.module) L local_correlation_plot() (in module scviva.pl.harreman) M module_score_correlation_plot() (in module scviva.pl.harreman) N NeighborhoodGraphField (class in scviva.data) nicheVAE (class in scviva.module) P plot_cell_type_map() (in module scviva.pl) plot_connectivity_distribution() (in module scviva.pl.scviva_de) plot_ct_interacting_cell_scores() (in module scviva.pl.harreman) plot_interacting_cell_scores() (in module scviva.pl.harreman) plot_interaction_module_correlation() (in module scviva.pl.harreman) plot_niche_de_decision_boundary() (in module scviva.pl.scviva_de) R ResolVI (class in scviva.model) RNAStereoscope (class in scviva.external) S SCVIVA (class in scviva.model) settings (in module scviva) SpatialBaseModel (class in scviva.model.base) SpatialCoordsField (class in scviva.data) SpatialDeconvolutionMixin (class in scviva.model.base) SpatialNeighborhoodMixin (class in scviva.model.base) SpatialPredictiveMixin (class in scviva.model.base) SpatialStereoscope (class in scviva.external) T Tangram (class in scviva.external)